Selected papers we published

Fetcho, J.R. and D.M. O'Malley (1995) Visualization of active neural circuitry in the spinal cord of intact zebrafish. J. Neurophysiol. 73:399-406.

Svoboda, K.R. and J.R. Fetcho (1996) Interactions between the neural networks for escape and swimming in goldfish.J. Neurosci. 16:843-852.

Cox, K.J.A and J.R. Fetcho (1996) Labeling blastomeres with a calcium indicator: a non-invasive method of visualizing neural activity in zebrafish.J. Neurosci. Meth. 68:185-191.

O'Malley, D.M.O., Y-H Kao and J.R. Fetcho (1996) Imaging the functional organization of zebrafish hindbrain segments during escape behaviors.Neuron. 17: 1145-1155.

Fetcho, J.R., K.J.A. Cox and D.M. O'Malley (1997) Imaging neural activity with single cell resolution in an intact behaving vertebrate.Biological Bulletin192:150-153.

Fetcho, J.R. and D.M. O'Malley (1997) Imaging neuronal networks in behaving animals.Current Opinion in Neurobiology. 7:832-838.

Fetcho, J.R., K.J.A. Cox and D.M.O'Malley (1998) Monitoring activity in neuronal populations with single cell resolution in a behaving vertebrate. Histochemical J.30:153-167.

Fetcho, J.R. and K.S. Liu (1998) Zebrafish as a model system for studying neuronal circuits and behavior.Annals of New York Academy of Sciences 860:333-345.

Fetcho, J.R. (1998) Movement through the last decade.Neuron21:477-478.

Liu, K.S. and J.R. Fetcho (1999) Laser ablations reveal functional relationships of segmental hindbrain neurons in zebrafish.Neuron23:325-335.

O'Malley D.M. and J.R. Fetcho (2000), The Zebrafish Hindbrain: A transparent system for imaging motor circuitry. In "Imaging Living Cells",Eds. R. Yuste, F. Lanni and A. Konnerth,Cold Spring Harbor Laboratory Press, CSH, NY.pp.14.1-14.12.

Fetcho JR (2001) Optical and genetic approaches toward understanding spinal circuits. In:Motor Neurobiology of the Spinal Cord(Cope TC, ed), pp 3-20. Boca Raton, FL.: CRC Press.

Lorent, K., K.S. Liu, J.R. Fetcho and M. Granato (2001) The zebrafishspace cadetgene controls axonal pathfinding of neurons modulating fast turning movements.Development. 128:2131-2142.

Ono, F., S. Higashijima, A. Shcherbatko, J. Fetcho, and P. Brehm (2001) Paralytic zebrafish lacking acetylcholine receptors fail to localize rapsyn clusters to the synapse. J. Neurosci 21:5439-5448.

Hale, M.E., Ritter, D.A., and Fetcho, J.R. (2001) A confocal study of spinal interneurons in living larval zebrafish. J. Comp. Neurol. 437:1-16

D. A. Ritter, D. H. Bhatt and J. R. Fetcho. (2001) In vivo imaging of zebrafish reveals differences in the spinal networks for escape and swimming movements. J. Neuroscience. 21:8956-8965.

Gleason, M.R., S. Higashijima, J. Dallman, K. Liu, G. Mandel and J.R. Fetcho (2003) Translocation of calcium/calmodulin-dependent protein kinase II to synaptic sites in vivo. Nature Neuroscience. 6: 217-218.

Higashijima, S., M.A. Masino, G. Mandel and J.R. Fetcho (2003) Imaging neuronal activity during zebrafish behavior with a genetically encoded calcium indicator. J. Neurophysiol. 90:3986-3997.

Liu, K, M. Gray, S. Otto, J.R. Fetcho and C.E. Beattie (2003) Mutations in deadly seven/notch1a reveal developmental plasticity in the escape response Circuit. J. Neurosci. 23:8159-8166

Armisen R, Gleason MR, Fetcho JR, Mandel G (2004) Tracking molecules in intact zebrafish. In: Imaging in Neuroscience and development: A laboratory Manual (Yuste R, Konnerth A, eds), pp 623-626. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.

Bhatt DH, Otto SJ, Depoister B, Fetcho JR (2004) Cyclic AMP-induced repair of zebrafish spinal circuits. Science 305:254-258.

Fetcho JR (2004) Imaging neuronal activity with calcium indicators in larval zebrafish. In: Imaging in Neuroscience and development: A laboratory Manual (Yuste R, Konnerth A, eds), pp 707-710. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.

Higashijima S, Masino MA, Mandel G, Fetcho JR (2004) Engrailed-1 expression marks a primitive class of inhibitory spinal interneuron. J Neurosci 24:5827-5839.

Higashijima SI, Schaefer M, Fetcho JR (2004) Neurotransmitter properties of spinal interneurons in embryonic and larval zebrafish. J Comp Neurol 480:19-37.

Higashijima SI, Mandel G, Fetcho JR (2004) Distribution of prospective glutamatergic, glycinergic, and GABAergic neurons in embryonic and larval zebrafish. J Comp Neurol 480:1-18.

McLean DL, Fetcho JR (2004a) Ontogeny and innervation patterns of dopaminergic, noradrenergic, and serotonergic neurons in larval zebrafish. J Comp Neurol 480:38-56.

McLean DL, Fetcho JR (2004b) Relationship of tyrosine hydroxylase and serotonin immunoreactivity to sensorimotor circuitry in larval zebrafish. J Comp Neurol 480:57-71.

Fetcho JR, Bhatt DH (2004) Genes and photons: new avenues into the neuronal basis of behavior.Curr Opin Neurobiol14:707-714.

Fetcho JR, Higashijima S (2004) Optical and genetic approaches toward understanding neuronal circuits in zebrafish.Integr Comp Biol44:57-70.

Masino, M, Fetcho JR (2005) Fictive swimming motor patterns in wild type and mutant larval zebrafish. J. Neurophysiol. 93:3177-3188.

Li, J, Mack, JA, Souren, M, Yaksi, E, Higashijima, S, Mione, M, Fetcho, JR, Friedrich, RW (2005) Early developmental of functional spatial maps in the zebrafish olfactory bulb. J. Neurosci. 25:5784-5795.

Pogoda, H. M., N. Sternheim,, D.A. Lyons, B. Diamond, T. A Hawkins, , I. G., Woods, D. H., Bhatt, , C.], Franzini-Armstrong, C. Dominguez, N . Arana, J. Jacobs, R. Nix, J.R. Fetcho, and W.S. Talbot (2006) A genetic screen identifies genes essential for development of myelinated axons in zebrafish. Dev Biol. 298,118-31.

Fetcho, J. R. (2006) Using zebrafish to image the structure and function of neuronal networksin vivo. In:Using zebrafish to study Neuroscience. (Nicolson T. ed) pp. 23-31. Atlanta, GA: Society for Neuroscience.

Bhatt, D. H., D.L. McLean, M.E. Hale and J.R. Fetcho (2007) Grading movement strength by changes in firing intensity versus recruitment of spinal interneurons. Neuron. 53:91-102.

McLean, D.L, J. Fan, SI Higashijima, M.E. Hale, J.R. Fetcho (2007) A topographic map of recruitment in spinal cord. Nature. 446:71-75

Fetcho, J. R. (2007) The utility of zebrafish for studies of the comparative biology of motor systems. JExp Zoolog B Mol Dev Evol. 308:550-562.

Bhatt, D.H., H. Patzelova, D.L. McLean, J.R. Fetcho and S.J. Zottoli (2007) Functional Regeneration in the Larval Zebrafish Spinal Cord. In:Model Organisms in Spinal Regeneration. (C.G. Becker and T. Becker eds.) pp. 263-288. Weinheim: Wiley-VCH Verlag GmbH & Co.

Liao, J.C. and J.R. Fetcho (2008) Shared versus specialized glycinergic interneurons in axial motor circuits of larval zebrafish. J. Neurosci. 28: 12982-12992.

McLean, D.L., Masino, M.A., Koh, I.Y.Y., Lindquist, W.B. and J. R. Fetcho (2008) Continuous shifts in the active set of spinal interneurons during changes in locomotor speed. Nature Neuroscience. 11:1419-1429.

Fetcho J.R., Higashijima S, McLean D.L. (2008) Zebrafish and motor control over the last decade. Brain Res Rev. 57(1):86-93

McLean, D.L. and J.R. Fetcho (2008) Using Imaging and genetics in zebrafish to study developing spinal circuits in vivo. Dev. Neurobiol. 68:817-834.

Mongeon, R., Gleason, M.R., Masino, M.A., Fetcho, J.R., Mandel, G., Brehm, P. and Dallman, J.E. (2008) Synaptic homeostasis in a zebrafish glial glycine transporter mutant. J. Neurophysiology. 100: 1716-1723.

McLean, D.L. and J.R. Fetcho (2009) Spinal interneurons differentiate sequentially from those driving the fastest swimming movements in larval zebrafish to those driving the slowest ones. J. Neurosci. 29:13566-13577.

McLean, D.L and J.R. Fetcho (2010) Movement technology and discovery in the zebrafish. Curr. Opin. Neurobiol. 21:110-115.

Fetcho, J.R. and D.L McLean (2010) Some principles of organization of spinal neurons underlying locomotion in zebrafish and their implications. Ann. NY Acad Sci. 1198:94-104.

Kinkhabwala A, Riley M, Koyama M, Monen J, Satou C, Kimura Y, Higashijima S, and J. Fetcho (2011) A structural and functional ground plan for neurons in the hindbrain of zebrafish. PNAS 108:1164-9.

Koyama M, Kinkhabwala A, Satou C, Higashijima S, and J. Fetcho (2011) Mapping a sensory-motor network onto a structural and functional ground plan in the hindbrain. PNAS 108:1170-5.

Farrar MJ, Wise FW, Fetcho JR, Schaffer CB (2011) In vivo imaging of myelin in the vertebrate central nervous system using third harmonic generation microscopy. Biophys J 100:1362-1371.

Farrar MJ, Bernstein IM, Schlafer DH, Cleland TA, Fetcho JR, Schaffer CB (2012) Chronic in vivo imaging in the mouse spinal cord using an implanted chamber. Nat Methods. 9:297-302.

Fetcho, J.R. (2012) Neuroscience: Crystal clear brains. Nature 23;485(7399):453-5.

Kishore, S. and JR Fetcho (2013) Homestatic regulation of dendritic dynamics in a motor map in vivo. Nature Communications. 4, Article number:2086

Koyama M, Minale F, Shum J, Nishimura N, Schaffer CB, Fetcho JR (2016) A circuit motif in the zebrafish hindbrain for a two alternative behavioral choice to turn left or right. Elife 9;5.

Chen S, Chiu CN, McArthur KL, Fetcho JR, Prober DA. (2016) TRP channel mediated neuronal activation and ablation in freely behaving zebrafish. Nat Methods. 2016 Feb;13(2):147-50

Chow DM, Zuchowski KA, Fetcho JR (2017) In vivo measurement of glycine receptor turnover and synaptic size reveals differences between functional classes of motoneurons in zebrafish. Curr Biol 27(8); 1173-1183.

McArthur KL, Fetcho JR (2017) Key features of structural and functional organization of zebrafish facial motor neurons are resilient to disruption of neuronal migration. Curr Biol 27(12); 1746-1756.

One snake paper: Joes first love, and first paper:

Gans, C. and J.R. Fetcho (1982) The Sri Lankan genus Aspidura (Serpentes, Reptilia, Colubridae). Annals of Carnegie Museum. 51:271-316.

Joe Fetcho 2014